Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trav5d-4Q5R1F6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5d-4Q5R1F6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5d-4Q5R1F6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5d-4Q5R1F6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5d-4Q5R1F6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav5d-4Q5R1F6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.52■□□□□ 0.39
Trav5d-4Q5R1F6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav5d-4Q5R1F6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5d-4Q5R1F6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5d-4Q5R1F6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5d-4Q5R1F6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5d-4Q5R1F6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms