Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hddc2Q3SXD3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hddc2Q3SXD3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.83■□□□□ 0.6
Hddc2Q3SXD3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hddc2Q3SXD3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hddc2Q3SXD3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hddc2Q3SXD3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Mir3960-201ENSMUST00000198213 73 ntBASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hddc2Q3SXD3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hddc2Q3SXD3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hddc2Q3SXD3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hddc2Q3SXD3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hddc2Q3SXD3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Hddc2Q3SXD3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hddc2Q3SXD3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms