Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Limk1P53668 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Limk1P53668 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.07■□□□□ 0.8
Limk1P53668 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Limk1P53668 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Limk1P53668 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
Limk1P53668 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Limk1P53668 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Limk1P53668 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.06■□□□□ 0.8
Limk1P53668 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.06■□□□□ 0.8
Limk1P53668 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Limk1P53668 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Limk1P53668 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Limk1P53668 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.05■□□□□ 0.8
Limk1P53668 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Limk1P53668 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Limk1P53668 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Limk1P53668 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Limk1P53668 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Limk1P53668 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Limk1P53668 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.04■□□□□ 0.8
Limk1P53668 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.04■□□□□ 0.8
Limk1P53668 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Limk1P53668 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Limk1P53668 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.03■□□□□ 0.8
Limk1P53668 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Limk1P53668 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Limk1P53668 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Limk1P53668 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Limk1P53668 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Limk1P53668 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.02■□□□□ 0.8
Limk1P53668 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Limk1P53668 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.02■□□□□ 0.79
Limk1P53668 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Limk1P53668 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.02■□□□□ 0.79
Limk1P53668 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Limk1P53668 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Limk1P53668 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20■□□□□ 0.79
Limk1P53668 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20■□□□□ 0.79
Limk1P53668 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Limk1P53668 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20■□□□□ 0.79
Limk1P53668 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Limk1P53668 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.99■□□□□ 0.79
Limk1P53668 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Limk1P53668 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Limk1P53668 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Limk1P53668 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Limk1P53668 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Limk1P53668 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Limk1P53668 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Limk1P53668 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Limk1P53668 Spcs1-204ENSMUST00000226782 949 ntBASIC19.97■□□□□ 0.79
Limk1P53668 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Limk1P53668 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Limk1P53668 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Limk1P53668 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limk1P53668 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.96■□□□□ 0.79
Limk1P53668 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Limk1P53668 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limk1P53668 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Limk1P53668 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.96■□□□□ 0.79
Limk1P53668 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Limk1P53668 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Limk1P53668 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.95■□□□□ 0.78
Limk1P53668 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms