Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
SftpbP50405 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SftpbP50405 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.86■□□□□ 0.93
SftpbP50405 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.86■□□□□ 0.93
SftpbP50405 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.86■□□□□ 0.93
SftpbP50405 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SftpbP50405 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SftpbP50405 Cap2-205ENSMUST00000225824 1634 ntBASIC20.86■□□□□ 0.93
SftpbP50405 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SftpbP50405 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SftpbP50405 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
SftpbP50405 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SftpbP50405 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.84■□□□□ 0.93
SftpbP50405 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SftpbP50405 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.84■□□□□ 0.93
SftpbP50405 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SftpbP50405 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SftpbP50405 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SftpbP50405 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SftpbP50405 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.83■□□□□ 0.93
SftpbP50405 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SftpbP50405 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SftpbP50405 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.83■□□□□ 0.92
SftpbP50405 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SftpbP50405 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.82■□□□□ 0.92
SftpbP50405 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SftpbP50405 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.82■□□□□ 0.92
SftpbP50405 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.82■□□□□ 0.92
SftpbP50405 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SftpbP50405 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SftpbP50405 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SftpbP50405 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SftpbP50405 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SftpbP50405 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.81■□□□□ 0.92
SftpbP50405 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.81■□□□□ 0.92
SftpbP50405 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.81■□□□□ 0.92
SftpbP50405 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.81■□□□□ 0.92
SftpbP50405 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SftpbP50405 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SftpbP50405 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SftpbP50405 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SftpbP50405 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SftpbP50405 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SftpbP50405 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SftpbP50405 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SftpbP50405 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SftpbP50405 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SftpbP50405 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SftpbP50405 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.79■□□□□ 0.92
SftpbP50405 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.78■□□□□ 0.92
SftpbP50405 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Gm45444-201ENSMUST00000211394 898 ntBASIC20.78■□□□□ 0.92
SftpbP50405 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms