Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a1P31648 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a1P31648 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a1P31648 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a1P31648 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a1P31648 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a1P31648 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a1P31648 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a1P31648 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a1P31648 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.51■□□□□ 0.39
Slc6a1P31648 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a1P31648 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.5■□□□□ 0.39
Slc6a1P31648 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.5■□□□□ 0.39
Slc6a1P31648 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a1P31648 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Slc6a1P31648 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc6a1P31648 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Slc6a1P31648 Gm7332-201ENSMUST00000118351 454 ntBASIC17.49■□□□□ 0.39
Slc6a1P31648 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.49■□□□□ 0.39
Slc6a1P31648 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.49■□□□□ 0.39
Slc6a1P31648 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a1P31648 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a1P31648 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a1P31648 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a1P31648 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a1P31648 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a1P31648 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Slc6a1P31648 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a1P31648 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a1P31648 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Slc6a1P31648 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc6a1P31648 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc6a1P31648 Gm14523-201ENSMUST00000117260 558 ntBASIC17.47■□□□□ 0.39
Slc6a1P31648 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Slc6a1P31648 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Slc6a1P31648 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc6a1P31648 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Slc6a1P31648 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Slc6a1P31648 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Slc6a1P31648 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc6a1P31648 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a1P31648 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Slc6a1P31648 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a1P31648 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Slc6a1P31648 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a1P31648 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a1P31648 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Slc6a1P31648 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a1P31648 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a1P31648 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a1P31648 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms