Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
Hoxc11P31313 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc11P31313 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc11P31313 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc11P31313 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.72■□□□□ 0.75
Hoxc11P31313 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc11P31313 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc11P31313 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc11P31313 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxc11P31313 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxc11P31313 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Hoxc11P31313 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.71■□□□□ 0.75
Hoxc11P31313 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc11P31313 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Hoxc11P31313 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxc11P31313 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Hoxc11P31313 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc11P31313 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc11P31313 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc11P31313 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxc11P31313 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Hoxc11P31313 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc11P31313 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc11P31313 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxc11P31313 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc11P31313 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc11P31313 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc11P31313 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hoxc11P31313 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Hoxc11P31313 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hoxc11P31313 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.67■□□□□ 0.74
Hoxc11P31313 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.67■□□□□ 0.74
Hoxc11P31313 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxc11P31313 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc11P31313 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxc11P31313 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.66■□□□□ 0.74
Hoxc11P31313 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc11P31313 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.66■□□□□ 0.74
Hoxc11P31313 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc11P31313 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxc11P31313 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc11P31313 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.66■□□□□ 0.74
Hoxc11P31313 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc11P31313 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc11P31313 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc11P31313 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxc11P31313 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxc11P31313 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxc11P31313 Serp2-204ENSMUST00000228055 705 ntBASIC19.65■□□□□ 0.74
Hoxc11P31313 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc11P31313 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc11P31313 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.64■□□□□ 0.73
Hoxc11P31313 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc11P31313 Gm7143-201ENSMUST00000222811 859 ntBASIC19.64■□□□□ 0.73
Hoxc11P31313 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc11P31313 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc11P31313 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc11P31313 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms