Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl3P27659 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rpl3P27659 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl3P27659 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl3P27659 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl3P27659 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Rpl3P27659 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rpl3P27659 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpl3P27659 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpl3P27659 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpl3P27659 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rpl3P27659 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl3P27659 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl3P27659 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.38■□□□□ 0.69
Rpl3P27659 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rpl3P27659 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rpl3P27659 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.37■□□□□ 0.69
Rpl3P27659 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl3P27659 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpl3P27659 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl3P27659 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
Rpl3P27659 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpl3P27659 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl3P27659 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpl3P27659 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpl3P27659 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpl3P27659 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Rpl3P27659 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rpl3P27659 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl3P27659 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.34■□□□□ 0.69
Rpl3P27659 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.34■□□□□ 0.69
Rpl3P27659 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl3P27659 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl3P27659 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rpl3P27659 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl3P27659 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.33■□□□□ 0.69
Rpl3P27659 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl3P27659 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl3P27659 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl3P27659 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Rpl3P27659 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
Rpl3P27659 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rpl3P27659 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.33■□□□□ 0.68
Rpl3P27659 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.33■□□□□ 0.68
Rpl3P27659 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl3P27659 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.32■□□□□ 0.68
Rpl3P27659 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.32■□□□□ 0.68
Rpl3P27659 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Rpl3P27659 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rpl3P27659 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.32■□□□□ 0.68
Rpl3P27659 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl3P27659 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rpl3P27659 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rpl3P27659 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.31■□□□□ 0.68
Rpl3P27659 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl3P27659 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rpl3P27659 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rpl3P27659 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl3P27659 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl3P27659 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl3P27659 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rpl3P27659 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl3P27659 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl3P27659 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms