Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.22■□□□□ 0.51
Ccl3P10855 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.22■□□□□ 0.51
Ccl3P10855 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccl3P10855 Gm26571-201ENSMUST00000181399 666 ntBASIC18.22■□□□□ 0.51
Ccl3P10855 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccl3P10855 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccl3P10855 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccl3P10855 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccl3P10855 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccl3P10855 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccl3P10855 Gm42569-201ENSMUST00000200539 472 ntBASIC18.21■□□□□ 0.51
Ccl3P10855 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccl3P10855 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccl3P10855 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccl3P10855 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccl3P10855 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccl3P10855 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.2■□□□□ 0.5
Ccl3P10855 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.2■□□□□ 0.5
Ccl3P10855 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.2■□□□□ 0.5
Ccl3P10855 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.2■□□□□ 0.5
Ccl3P10855 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ccl3P10855 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.2■□□□□ 0.5
Ccl3P10855 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccl3P10855 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ccl3P10855 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccl3P10855 Smad6-203ENSMUST00000179458 273 ntBASIC18.19■□□□□ 0.5
Ccl3P10855 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Ccl3P10855 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccl3P10855 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccl3P10855 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Gm27405-201ENSMUST00000184201 112 ntBASIC18.18■□□□□ 0.5
Ccl3P10855 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccl3P10855 Gm42642-201ENSMUST00000200683 355 ntBASIC18.18■□□□□ 0.5
Ccl3P10855 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccl3P10855 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccl3P10855 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccl3P10855 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccl3P10855 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.17■□□□□ 0.5
Ccl3P10855 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.17■□□□□ 0.5
Ccl3P10855 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccl3P10855 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccl3P10855 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccl3P10855 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccl3P10855 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccl3P10855 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.16■□□□□ 0.5
Ccl3P10855 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccl3P10855 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccl3P10855 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.16■□□□□ 0.5
Ccl3P10855 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccl3P10855 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.16■□□□□ 0.5
Ccl3P10855 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccl3P10855 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccl3P10855 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccl3P10855 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccl3P10855 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccl3P10855 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccl3P10855 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.15■□□□□ 0.5
Ccl3P10855 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccl3P10855 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccl3P10855 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccl3P10855 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccl3P10855 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccl3P10855 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccl3P10855 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccl3P10855 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccl3P10855 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccl3P10855 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccl3P10855 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms