Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp28P10078 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp28P10078 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp28P10078 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp28P10078 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Zfp28P10078 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Zfp28P10078 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.72■□□□□ 0.59
Zfp28P10078 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Zfp28P10078 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Zfp28P10078 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Zfp28P10078 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zfp28P10078 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Zfp28P10078 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zfp28P10078 Gm14523-201ENSMUST00000117260 558 ntBASIC18.71■□□□□ 0.59
Zfp28P10078 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zfp28P10078 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zfp28P10078 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Zfp28P10078 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Zfp28P10078 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Zfp28P10078 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Zfp28P10078 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Zfp28P10078 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Zfp28P10078 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.7■□□□□ 0.58
Zfp28P10078 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zfp28P10078 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp28P10078 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Zfp28P10078 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Zfp28P10078 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp28P10078 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp28P10078 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp28P10078 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zfp28P10078 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Gm7332-201ENSMUST00000118351 454 ntBASIC18.68■□□□□ 0.58
Zfp28P10078 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Zfp28P10078 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Zfp28P10078 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Zfp28P10078 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zfp28P10078 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.67■□□□□ 0.58
Zfp28P10078 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zfp28P10078 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Zfp28P10078 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Zfp28P10078 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Zfp28P10078 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Zfp28P10078 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zfp28P10078 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Zfp28P10078 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.65■□□□□ 0.58
Zfp28P10078 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Zfp28P10078 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.65■□□□□ 0.58
Zfp28P10078 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.65■□□□□ 0.58
Zfp28P10078 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zfp28P10078 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zfp28P10078 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zfp28P10078 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
Zfp28P10078 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms