Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PrnpP04925 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PrnpP04925 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PrnpP04925 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.38■■□□□ 1.01
PrnpP04925 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.38■■□□□ 1.01
PrnpP04925 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PrnpP04925 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PrnpP04925 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PrnpP04925 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PrnpP04925 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.36■■□□□ 1.01
PrnpP04925 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.36■■□□□ 1.01
PrnpP04925 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PrnpP04925 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PrnpP04925 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.36■■□□□ 1.01
PrnpP04925 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PrnpP04925 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PrnpP04925 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.35■■□□□ 1.01
PrnpP04925 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.35■■□□□ 1.01
PrnpP04925 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PrnpP04925 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.34■■□□□ 1.01
PrnpP04925 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.34■■□□□ 1.01
PrnpP04925 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PrnpP04925 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PrnpP04925 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PrnpP04925 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.33■■□□□ 1.01
PrnpP04925 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.33■■□□□ 1.01
PrnpP04925 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Gm40848-201ENSMUST00000221998 324 ntBASIC21.33■■□□□ 1.01
PrnpP04925 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PrnpP04925 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PrnpP04925 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PrnpP04925 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.32■■□□□ 1
PrnpP04925 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.32■■□□□ 1
PrnpP04925 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PrnpP04925 Gm29257-201ENSMUST00000186115 639 ntBASIC21.32■■□□□ 1
PrnpP04925 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PrnpP04925 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PrnpP04925 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.32■■□□□ 1
PrnpP04925 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PrnpP04925 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PrnpP04925 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PrnpP04925 Smad6-203ENSMUST00000179458 273 ntBASIC21.31■■□□□ 1
PrnpP04925 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
PrnpP04925 Gm7291-201ENSMUST00000199147 382 ntBASIC21.31■■□□□ 1
PrnpP04925 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.31■■□□□ 1
PrnpP04925 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.31■■□□□ 1
PrnpP04925 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.31■■□□□ 1
PrnpP04925 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.3■■□□□ 1
PrnpP04925 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PrnpP04925 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.29■■□□□ 1
PrnpP04925 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.29■■□□□ 1
PrnpP04925 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.28■■□□□ 1
PrnpP04925 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PrnpP04925 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.28■■□□□ 1
PrnpP04925 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.28■■□□□ 1
PrnpP04925 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.28■■□□□ 1
PrnpP04925 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.28■■□□□ 1
PrnpP04925 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PrnpP04925 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms