Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.52■□□□□ 0.55
Pdlim3O70209 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim3O70209 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim3O70209 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Gm7332-201ENSMUST00000118351 454 ntBASIC18.51■□□□□ 0.55
Pdlim3O70209 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.51■□□□□ 0.55
Pdlim3O70209 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pdlim3O70209 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim3O70209 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pdlim3O70209 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pdlim3O70209 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pdlim3O70209 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.5■□□□□ 0.55
Pdlim3O70209 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim3O70209 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim3O70209 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim3O70209 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim3O70209 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim3O70209 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim3O70209 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim3O70209 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
Pdlim3O70209 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim3O70209 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim3O70209 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.49■□□□□ 0.55
Pdlim3O70209 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim3O70209 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim3O70209 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pdlim3O70209 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pdlim3O70209 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim3O70209 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 Golph3-202ENSMUST00000226517 2359 ntBASIC18.47■□□□□ 0.55
Pdlim3O70209 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim3O70209 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.47■□□□□ 0.55
Pdlim3O70209 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim3O70209 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim3O70209 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim3O70209 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim3O70209 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim3O70209 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim3O70209 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pdlim3O70209 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.46■□□□□ 0.55
Pdlim3O70209 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.46■□□□□ 0.55
Pdlim3O70209 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim3O70209 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim3O70209 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pdlim3O70209 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Pdlim3O70209 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.54
Pdlim3O70209 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pdlim3O70209 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim3O70209 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pdlim3O70209 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim3O70209 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pdlim3O70209 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim3O70209 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdlim3O70209 Iqck-206ENSMUST00000208658 2891 ntBASIC18.44■□□□□ 0.54
Pdlim3O70209 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim3O70209 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim3O70209 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pdlim3O70209 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdlim3O70209 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.44■□□□□ 0.54
Pdlim3O70209 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim3O70209 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim3O70209 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim3O70209 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.42■□□□□ 0.54
Pdlim3O70209 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms