Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf13O54965 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf13O54965 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.48■□□□□ 0.55
Rnf13O54965 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf13O54965 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rnf13O54965 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf13O54965 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf13O54965 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf13O54965 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf13O54965 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rnf13O54965 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.45■□□□□ 0.54
Rnf13O54965 Gm12366-201ENSMUST00000121722 873 ntBASIC18.45■□□□□ 0.54
Rnf13O54965 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf13O54965 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.45■□□□□ 0.54
Rnf13O54965 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.45■□□□□ 0.54
Rnf13O54965 Gm5786-201ENSMUST00000085368 882 ntBASIC18.45■□□□□ 0.54
Rnf13O54965 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf13O54965 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf13O54965 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Rnf13O54965 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Rnf13O54965 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.44■□□□□ 0.54
Rnf13O54965 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.44■□□□□ 0.54
Rnf13O54965 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf13O54965 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf13O54965 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 Gm10420-201ENSMUST00000121713 882 ntBASIC18.43■□□□□ 0.54
Rnf13O54965 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf13O54965 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf13O54965 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rnf13O54965 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.43■□□□□ 0.54
Rnf13O54965 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf13O54965 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rnf13O54965 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.42■□□□□ 0.54
Rnf13O54965 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf13O54965 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf13O54965 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf13O54965 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf13O54965 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.41■□□□□ 0.54
Rnf13O54965 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf13O54965 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rnf13O54965 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Rnf13O54965 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.41■□□□□ 0.54
Rnf13O54965 Golph3-202ENSMUST00000226517 2359 ntBASIC18.41■□□□□ 0.54
Rnf13O54965 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf13O54965 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.41■□□□□ 0.54
Rnf13O54965 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rnf13O54965 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf13O54965 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf13O54965 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf13O54965 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf13O54965 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf13O54965 Mir6538-201ENSMUST00000183713 110 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms