Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phox2bO35690 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phox2bO35690 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.52■□□□□ 0.88
Phox2bO35690 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Phox2bO35690 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phox2bO35690 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.51■□□□□ 0.87
Phox2bO35690 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.51■□□□□ 0.87
Phox2bO35690 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Phox2bO35690 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Phox2bO35690 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phox2bO35690 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phox2bO35690 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phox2bO35690 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phox2bO35690 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Phox2bO35690 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Phox2bO35690 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phox2bO35690 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.49■□□□□ 0.87
Phox2bO35690 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Phox2bO35690 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Phox2bO35690 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phox2bO35690 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Phox2bO35690 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Phox2bO35690 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Phox2bO35690 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.48■□□□□ 0.87
Phox2bO35690 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Phox2bO35690 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.48■□□□□ 0.87
Phox2bO35690 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Phox2bO35690 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phox2bO35690 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phox2bO35690 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.47■□□□□ 0.87
Phox2bO35690 Gm22240-201ENSMUST00000175225 82 ntBASIC20.47■□□□□ 0.87
Phox2bO35690 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phox2bO35690 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phox2bO35690 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Phox2bO35690 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Phox2bO35690 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Phox2bO35690 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.46■□□□□ 0.87
Phox2bO35690 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.46■□□□□ 0.87
Phox2bO35690 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.46■□□□□ 0.87
Phox2bO35690 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Phox2bO35690 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phox2bO35690 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Phox2bO35690 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Phox2bO35690 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Phox2bO35690 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.45■□□□□ 0.86
Phox2bO35690 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Phox2bO35690 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.45■□□□□ 0.86
Phox2bO35690 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Phox2bO35690 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Phox2bO35690 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.44■□□□□ 0.86
Phox2bO35690 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Phox2bO35690 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Phox2bO35690 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.44■□□□□ 0.86
Phox2bO35690 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.44■□□□□ 0.86
Phox2bO35690 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.44■□□□□ 0.86
Phox2bO35690 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.44■□□□□ 0.86
Phox2bO35690 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phox2bO35690 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.43■□□□□ 0.86
Phox2bO35690 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Phox2bO35690 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Phox2bO35690 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Phox2bO35690 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Phox2bO35690 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Phox2bO35690 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.43■□□□□ 0.86
Phox2bO35690 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Phox2bO35690 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Phox2bO35690 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.42■□□□□ 0.86
Phox2bO35690 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Phox2bO35690 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms