Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.27■□□□□ 0.36
Prrt1O35449 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.27■□□□□ 0.36
Prrt1O35449 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prrt1O35449 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prrt1O35449 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prrt1O35449 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prrt1O35449 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prrt1O35449 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prrt1O35449 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Prrt1O35449 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Prrt1O35449 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Prrt1O35449 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prrt1O35449 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Prrt1O35449 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.25■□□□□ 0.35
Prrt1O35449 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prrt1O35449 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prrt1O35449 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.25■□□□□ 0.35
Prrt1O35449 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Prrt1O35449 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prrt1O35449 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Prrt1O35449 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Prrt1O35449 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.24■□□□□ 0.35
Prrt1O35449 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.24■□□□□ 0.35
Prrt1O35449 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prrt1O35449 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Prrt1O35449 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.23■□□□□ 0.35
Prrt1O35449 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.23■□□□□ 0.35
Prrt1O35449 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prrt1O35449 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.22■□□□□ 0.35
Prrt1O35449 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prrt1O35449 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prrt1O35449 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.22■□□□□ 0.35
Prrt1O35449 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.22■□□□□ 0.35
Prrt1O35449 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prrt1O35449 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prrt1O35449 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Prrt1O35449 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Prrt1O35449 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
Prrt1O35449 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.21■□□□□ 0.35
Prrt1O35449 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Gm7432-201ENSMUST00000210343 879 ntBASIC17.21■□□□□ 0.35
Prrt1O35449 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.21■□□□□ 0.35
Prrt1O35449 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.21■□□□□ 0.35
Prrt1O35449 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prrt1O35449 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Gm11599-201ENSMUST00000118720 878 ntBASIC17.2■□□□□ 0.34
Prrt1O35449 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.2■□□□□ 0.34
Prrt1O35449 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Prrt1O35449 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prrt1O35449 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prrt1O35449 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.19■□□□□ 0.34
Prrt1O35449 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms