Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trav12d-1A0N8R0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav12d-1A0N8R0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav12d-1A0N8R0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav12d-1A0N8R0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Trav12d-1A0N8R0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav12d-1A0N8R0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav12d-1A0N8R0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12d-1A0N8R0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12d-1A0N8R0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav12d-1A0N8R0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav12d-1A0N8R0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav12d-1A0N8R0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav12d-1A0N8R0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav12d-1A0N8R0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav12d-1A0N8R0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trav12d-1A0N8R0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12d-1A0N8R0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12d-1A0N8R0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms