Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Igkv1-88A0A140T8N1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Igkv1-88A0A140T8N1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Igkv1-88A0A140T8N1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.42□□□□□ -0.26
Igkv1-88A0A140T8N1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv1-88A0A140T8N1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Gm27502-201ENSMUST00000183495 199 ntBASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv1-88A0A140T8N1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Igkv1-88A0A140T8N1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv1-88A0A140T8N1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Igkv1-88A0A140T8N1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms