Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.33■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.33■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sirpb1aA0A0A6YYP6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Gm27502-201ENSMUST00000183495 199 ntBASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Gm14523-201ENSMUST00000117260 558 ntBASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1aA0A0A6YYP6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.28■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Sirpb1aA0A0A6YYP6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Golph3-202ENSMUST00000226517 2359 ntBASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gm7332-201ENSMUST00000118351 454 ntBASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms