Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.57□□□□□ -0.4
Trim54Q9ERP3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.57□□□□□ -0.4
Trim54Q9ERP3 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim54Q9ERP3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm37826-201ENSMUST00000195329 322 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim54Q9ERP3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gm22442-201ENSMUST00000157256 144 ntBASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gm15744-201ENSMUST00000161734 213 ntBASIC12.55□□□□□ -0.4
Trim54Q9ERP3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gm7741-201ENSMUST00000181445 989 ntBASIC12.55□□□□□ -0.4
Trim54Q9ERP3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.55□□□□□ -0.4
Trim54Q9ERP3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim54Q9ERP3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms