Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm15329-201ENSMUST00000121408 155 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm15549-201ENSMUST00000121595 622 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.21■□□□□ 0.03
U2af1Q9D883 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm44315-201ENSMUST00000203041 219 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.21■□□□□ 0.03
U2af1Q9D883 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
U2af1Q9D883 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
U2af1Q9D883 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
U2af1Q9D883 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
U2af1Q9D883 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
U2af1Q9D883 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
U2af1Q9D883 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
U2af1Q9D883 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Gm11667-201ENSMUST00000119828 486 ntBASIC15.2■□□□□ 0.02
U2af1Q9D883 Gm14460-201ENSMUST00000121511 639 ntBASIC15.2■□□□□ 0.02
U2af1Q9D883 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.2■□□□□ 0.02
U2af1Q9D883 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
U2af1Q9D883 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 AC124397.2-201ENSMUST00000225575 2215 ntBASIC15.2■□□□□ 0.02
U2af1Q9D883 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.2■□□□□ 0.02
U2af1Q9D883 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
U2af1Q9D883 Pck2-205ENSMUST00000226352 2784 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
U2af1Q9D883 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm23272-201ENSMUST00000104053 129 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm15615-201ENSMUST00000118876 198 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm37458-201ENSMUST00000194055 410 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm43520-201ENSMUST00000197996 164 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm29787-201ENSMUST00000222129 849 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
U2af1Q9D883 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.19■□□□□ 0.02
U2af1Q9D883 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
U2af1Q9D883 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms