Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm5419-201ENSMUST00000119301 527 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm14277-201ENSMUST00000121195 360 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm12164-201ENSMUST00000121695 551 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm28071-201ENSMUST00000190355 478 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shmt2Q9CZN7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm18038-201ENSMUST00000197900 485 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm43002-201ENSMUST00000200310 155 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm5363-201ENSMUST00000211927 938 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shmt2Q9CZN7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms