Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
ClpsQ9CQC2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm8111-201ENSMUST00000117659 987 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm13888-201ENSMUST00000119148 422 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Olfml3-204ENSMUST00000169286 874 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm28388-201ENSMUST00000186262 437 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm29067-201ENSMUST00000190821 470 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm8365-201ENSMUST00000197334 648 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ClpsQ9CQC2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ClpsQ9CQC2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm12218-201ENSMUST00000117666 399 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm12899-201ENSMUST00000120565 551 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm1848-201ENSMUST00000120711 789 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm5468-202ENSMUST00000227851 682 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Gm8420-201ENSMUST00000097103 598 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ClpsQ9CQC2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms