Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm43852-201ENSMUST00000202098 917 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm23680-201ENSMUST00000083162 164 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm14892-201ENSMUST00000117636 267 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Mir6407-201ENSMUST00000184510 101 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm44315-201ENSMUST00000203041 219 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.53□□□□□ -0.88
Prpf8Q99PV0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Prpf8Q99PV0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm11949-201ENSMUST00000117640 372 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm15615-201ENSMUST00000118876 198 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm8531-201ENSMUST00000188319 893 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Matn2-203ENSMUST00000226766 3252 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Prpf8Q99PV0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm14274-201ENSMUST00000117182 615 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm15610-201ENSMUST00000120584 195 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm5257-201ENSMUST00000121823 790 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm7940-201ENSMUST00000218195 769 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms