Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm13296-201ENSMUST00000117854 997 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm11500-201ENSMUST00000118237 601 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Mir8109-201ENSMUST00000184375 117 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Mir8093-201ENSMUST00000185043 137 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm5982-201ENSMUST00000196234 512 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm43966-201ENSMUST00000203301 612 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdk5rap3Q99LM2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm38117-201ENSMUST00000194653 939 ntBASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.98□□□□□ -0.49
Cdk5rap3Q99LM2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 BC043934-202ENSMUST00000185694 2356 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm4310-201ENSMUST00000177847 889 ntBASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdk5rap3Q99LM2 Gm8343-201ENSMUST00000182705 994 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms