Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp11Q99K46 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.22□□□□□ -0.45
Usp11Q99K46 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp11Q99K46 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.22□□□□□ -0.45
Usp11Q99K46 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.22□□□□□ -0.45
Usp11Q99K46 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp11Q99K46 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp11Q99K46 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.22□□□□□ -0.45
Usp11Q99K46 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp11Q99K46 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp11Q99K46 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.21□□□□□ -0.45
Usp11Q99K46 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp11Q99K46 Gm24990-201ENSMUST00000157406 323 ntBASIC12.21□□□□□ -0.45
Usp11Q99K46 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.21□□□□□ -0.45
Usp11Q99K46 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp11Q99K46 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.21□□□□□ -0.45
Usp11Q99K46 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp11Q99K46 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp11Q99K46 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp11Q99K46 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.21□□□□□ -0.46
Usp11Q99K46 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp11Q99K46 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm15610-201ENSMUST00000120584 195 ntBASIC12.2□□□□□ -0.46
Usp11Q99K46 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp11Q99K46 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm18893-201ENSMUST00000198416 943 ntBASIC12.2□□□□□ -0.46
Usp11Q99K46 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp11Q99K46 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.2□□□□□ -0.46
Usp11Q99K46 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.2□□□□□ -0.46
Usp11Q99K46 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp11Q99K46 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms