Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm8459-201ENSMUST00000162504 760 ntBASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm20495-201ENSMUST00000173902 235 ntBASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm5733-201ENSMUST00000190232 939 ntBASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb1Q91Y08 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdhb1Q91Y08 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm13035-201ENSMUST00000117496 342 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm12579-201ENSMUST00000118040 783 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm12997-201ENSMUST00000120207 640 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm24990-201ENSMUST00000157406 323 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm27341-201ENSMUST00000183570 106 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm28450-201ENSMUST00000187349 638 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm44008-201ENSMUST00000204345 412 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.02□□□□□ -0.49
Pcdhb1Q91Y08 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm7150-201ENSMUST00000122032 981 ntBASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdhb1Q91Y08 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms