Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm9081-201ENSMUST00000182346 991 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm28833-201ENSMUST00000189671 559 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm17889-201ENSMUST00000198410 598 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Mt1-202ENSMUST00000211807 1085 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp7Q8R1T1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm25053-201ENSMUST00000103982 133 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm25922-201ENSMUST00000104281 130 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm15374-201ENSMUST00000119313 844 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm24679-201ENSMUST00000158762 111 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm8723-201ENSMUST00000166076 820 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm8701-201ENSMUST00000169259 874 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm25053-202ENSMUST00000199731 132 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm43671-201ENSMUST00000200422 433 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp7Q8R1T1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp7Q8R1T1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms