Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm23912-201ENSMUST00000104687 87 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm37246-201ENSMUST00000192665 835 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm45770-201ENSMUST00000212105 616 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm1821-202ENSMUST00000227415 750 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 BC043934-202ENSMUST00000185694 2356 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.87□□□□□ -0.51
CopaQ8CIE6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm15432-201ENSMUST00000121106 195 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm10051-201ENSMUST00000145209 414 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.86□□□□□ -0.51
CopaQ8CIE6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopaQ8CIE6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm12857-201ENSMUST00000117678 592 ntBASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm12036-201ENSMUST00000120008 530 ntBASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm14247-201ENSMUST00000120950 237 ntBASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.85□□□□□ -0.51
CopaQ8CIE6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.85□□□□□ -0.51
CopaQ8CIE6 Gm7467-201ENSMUST00000185173 652 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms