Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm12164-201ENSMUST00000121695 551 ntBASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Mir5132-201ENSMUST00000175166 71 ntBASIC11.69□□□□□ -0.54
Clip4Q8CI96 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.69□□□□□ -0.54
Clip4Q8CI96 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm18038-201ENSMUST00000197900 485 ntBASIC11.69□□□□□ -0.54
Clip4Q8CI96 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clip4Q8CI96 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Mir5120-201ENSMUST00000175020 78 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm25732-201ENSMUST00000175168 60 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm270-201ENSMUST00000223010 976 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.68□□□□□ -0.54
Clip4Q8CI96 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.68□□□□□ -0.54
Clip4Q8CI96 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.67□□□□□ -0.54
Clip4Q8CI96 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.67□□□□□ -0.54
Clip4Q8CI96 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.67□□□□□ -0.54
Clip4Q8CI96 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Mir7677-201ENSMUST00000184226 67 ntBASIC11.67□□□□□ -0.54
Clip4Q8CI96 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clip4Q8CI96 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms