Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm31256-201ENSMUST00000194705 506 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.18□□□□□ -0.46
Ccdc28aQ8CEI3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ccdc28aQ8CEI3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc28aQ8CEI3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms