Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm23270-201ENSMUST00000104055 131 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm11222-201ENSMUST00000119005 738 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm5455-201ENSMUST00000058710 715 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nhlrc3Q8CCH2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nhlrc3Q8CCH2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm11930-201ENSMUST00000117788 190 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm45598-202ENSMUST00000210719 986 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gzmn-202ENSMUST00000225535 989 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nhlrc3Q8CCH2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms