Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Spcs1-203ENSMUST00000226374 592 ntBASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4aQ8C9S8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.02□□□□□ -0.16
Atg4aQ8C9S8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm12566-201ENSMUST00000121479 359 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm8574-201ENSMUST00000203207 924 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm5996-201ENSMUST00000211110 718 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm2517-201ENSMUST00000215651 348 ntBASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4aQ8C9S8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm16166-201ENSMUST00000118291 787 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm15352-201ENSMUST00000118696 270 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm11836-201ENSMUST00000121022 441 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Mir8115-201ENSMUST00000184992 119 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.01□□□□□ -0.17
Atg4aQ8C9S8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms