Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm44304-201ENSMUST00000200509 145 ntBASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.01□□□□□ -0.97
Chd9Q8BYH8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Chd9Q8BYH8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm8754-201ENSMUST00000118391 520 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm12240-201ENSMUST00000120178 229 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm7741-201ENSMUST00000181445 989 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC9□□□□□ -0.97
Chd9Q8BYH8 AC159196.1-201ENSMUST00000225524 377 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 AC101205.2-201ENSMUST00000226206 715 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm17435-202ENSMUST00000212699 1998 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Mir453-201ENSMUST00000104732 82 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm12389-201ENSMUST00000117696 418 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC9□□□□□ -0.97
Chd9Q8BYH8 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Chd9Q8BYH8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm45743-201ENSMUST00000212701 2795 ntBASIC9□□□□□ -0.97
Chd9Q8BYH8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9□□□□□ -0.97
Chd9Q8BYH8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Chd9Q8BYH8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms