Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trerf1Q8BXJ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm14028-201ENSMUST00000117434 479 ntBASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm12164-201ENSMUST00000121695 551 ntBASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm27341-201ENSMUST00000183570 106 ntBASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trerf1Q8BXJ2 Gm13437-201ENSMUST00000122434 1981 ntBASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.3□□□□□ -0.44
Trerf1Q8BXJ2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms