Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Gm5298-201ENSMUST00000201122 892 ntBASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Gm5468-202ENSMUST00000227851 682 ntBASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc43a1Q8BSM7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm4294-201ENSMUST00000105169 614 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm15329-201ENSMUST00000121408 155 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm15744-201ENSMUST00000161734 213 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm37284-201ENSMUST00000193607 539 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm5100-201ENSMUST00000195631 589 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm17825-201ENSMUST00000206836 794 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm9139-201ENSMUST00000218817 700 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Rgr-203ENSMUST00000225070 4704 ntBASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc43a1Q8BSM7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gm13422-201ENSMUST00000118834 504 ntBASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gm11675-201ENSMUST00000121873 832 ntBASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.68□□□□□ -0.54
Slc43a1Q8BSM7 Mir6407-201ENSMUST00000184510 101 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms