Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.87□□□□□ -0.51
Chmp2bQ8BJF9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm12742-201ENSMUST00000117326 410 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm13392-201ENSMUST00000117708 150 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm14726-201ENSMUST00000120623 896 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2bQ8BJF9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Gm9368-201ENSMUST00000219348 831 ntBASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2bQ8BJF9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.84□□□□□ -0.51
Chmp2bQ8BJF9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms