Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm26013-201ENSMUST00000104404 119 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm15352-201ENSMUST00000118696 270 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm16071-201ENSMUST00000119589 793 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm11979-201ENSMUST00000119629 743 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm8343-201ENSMUST00000182705 994 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm17826-201ENSMUST00000189720 798 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm19994-201ENSMUST00000217086 586 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm3619-201ENSMUST00000219947 775 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Prpf38bQ80SY5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm12857-201ENSMUST00000117678 592 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm11956-201ENSMUST00000119525 512 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm4157-201ENSMUST00000211647 679 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm9996-201ENSMUST00000070359 913 ntBASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.25□□□□□ -0.45
Prpf38bQ80SY5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prpf38bQ80SY5 Gm28388-201ENSMUST00000186262 437 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms