Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm25226-201ENSMUST00000158198 123 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm26272-201ENSMUST00000179241 132 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx55Q6ZPL9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm44814-201ENSMUST00000207018 434 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx55Q6ZPL9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx55Q6ZPL9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx55Q6ZPL9 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms