Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rad54bQ6PFE3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 AY036118-201ENSMUST00000200021 923 ntBASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm44008-201ENSMUST00000204345 412 ntBASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rad54bQ6PFE3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm15207-201ENSMUST00000119259 442 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm13665-201ENSMUST00000120830 528 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm27516-201ENSMUST00000184237 98 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm45224-201ENSMUST00000208203 414 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rad54bQ6PFE3 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms