Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm5451-201ENSMUST00000080545 579 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pdzrn3Q69ZS0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdzrn3Q69ZS0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gm12419-201ENSMUST00000116649 636 ntBASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gm37981-201ENSMUST00000194280 535 ntBASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gm45113-201ENSMUST00000207518 165 ntBASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Gm8342-201ENSMUST00000209839 757 ntBASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdzrn3Q69ZS0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm15744-201ENSMUST00000161734 213 ntBASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm3619-201ENSMUST00000219947 775 ntBASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.19□□□□□ -0.14
Pdzrn3Q69ZS0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm23272-201ENSMUST00000104053 129 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm25766-201ENSMUST00000104101 131 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm25063-201ENSMUST00000104666 94 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm26134-201ENSMUST00000178484 110 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm29410-201ENSMUST00000188383 694 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Olfr584-201ENSMUST00000098210 964 ntBASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdzrn3Q69ZS0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms