Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ecm1Q61508 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.79□□□□□ -0.36
Ecm1Q61508 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm12389-201ENSMUST00000117696 418 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm12948-201ENSMUST00000119406 682 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm12453-201ENSMUST00000121981 331 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Olfml3-204ENSMUST00000169286 874 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm42430-201ENSMUST00000197209 616 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm8255-201ENSMUST00000218693 305 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Id2-203ENSMUST00000222667 958 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Paupar-201ENSMUST00000194826 3482 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.78□□□□□ -0.36
Ecm1Q61508 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ecm1Q61508 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ecm1Q61508 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Ecm1Q61508 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ecm1Q61508 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm25562-201ENSMUST00000104608 133 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm9133-201ENSMUST00000118289 540 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm20414-201ENSMUST00000172918 646 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm5870-201ENSMUST00000196461 282 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.77□□□□□ -0.37
Ecm1Q61508 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ecm1Q61508 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ecm1Q61508 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms