Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm8100-201ENSMUST00000182906 988 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm19287-201ENSMUST00000203190 358 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm6905-201ENSMUST00000205729 511 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm5369-201ENSMUST00000217499 588 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ClpbQ60649 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm11663-201ENSMUST00000117888 290 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Gm11700-201ENSMUST00000119409 403 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.13□□□□□ -0.63
ClpbQ60649 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm6114-201ENSMUST00000182472 968 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Gm9797-202ENSMUST00000218003 294 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.13□□□□□ -0.63
ClpbQ60649 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
ClpbQ60649 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
ClpbQ60649 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
ClpbQ60649 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
ClpbQ60649 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
ClpbQ60649 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.12□□□□□ -0.63
ClpbQ60649 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.12□□□□□ -0.63
ClpbQ60649 Gm9192-201ENSMUST00000183221 985 ntBASIC11.12□□□□□ -0.63
ClpbQ60649 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.12□□□□□ -0.63
ClpbQ60649 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
ClpbQ60649 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms