Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir877-201ENSMUST00000104738 85 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm12857-201ENSMUST00000117678 592 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm7940-201ENSMUST00000218195 769 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm8420-201ENSMUST00000097103 598 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Gm27530-201ENSMUST00000184096 98 ntBASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Gm5982-201ENSMUST00000196234 512 ntBASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5d-4Q5R1F6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm11663-201ENSMUST00000117888 290 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm14208-201ENSMUST00000119645 678 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Mir6420-201ENSMUST00000185032 102 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Mir8093-201ENSMUST00000185043 137 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms