Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Mir877-201ENSMUST00000104738 85 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm31256-201ENSMUST00000194705 506 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm43966-201ENSMUST00000203301 612 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm30285-201ENSMUST00000214614 422 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43aQ3TL54 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43aQ3TL54 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm15004-201ENSMUST00000119192 630 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm4857-201ENSMUST00000192718 785 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm8956-201ENSMUST00000203939 825 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43aQ3TL54 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms