Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Btrc-209ENSMUST00000224478 2194 ntBASIC12.6□□□□□ -0.39
Trim43cP86449 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim43cP86449 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Trim43cP86449 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim43cP86449 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Gm6108-201ENSMUST00000208365 367 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Ntng1-201ENSMUST00000051253 327 ntBASIC12.59□□□□□ -0.39
Trim43cP86449 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43cP86449 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43cP86449 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim43cP86449 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim43cP86449 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim43cP86449 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43cP86449 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43cP86449 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43cP86449 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43cP86449 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim43cP86449 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim43cP86449 Gm22920-201ENSMUST00000102175 109 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim43cP86449 Gm17825-201ENSMUST00000206836 794 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.58□□□□□ -0.4
Trim43cP86449 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim43cP86449 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.58□□□□□ -0.4
Trim43cP86449 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim43cP86449 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Erich3-203ENSMUST00000189969 3460 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms