Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm14441-201ENSMUST00000121960 540 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Pdlim4P70271 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.68□□□□□ -0.86
Pdlim4P70271 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Pdlim4P70271 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Pdlim4P70271 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm16570-201ENSMUST00000161951 436 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm27552-201ENSMUST00000183351 62 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm27844-201ENSMUST00000183613 62 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm10288-201ENSMUST00000084614 537 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm21811-201ENSMUST00000096485 930 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.67□□□□□ -0.86
Pdlim4P70271 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Pdlim4P70271 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Pdlim4P70271 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Pdlim4P70271 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.66□□□□□ -0.86
Pdlim4P70271 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Pdlim4P70271 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms