Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16219-201ENSMUST00000120096 274 ntBASIC14.61□□□□□ -0.07
Msh6P54276 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.61□□□□□ -0.07
Msh6P54276 Gm22846-201ENSMUST00000157706 270 ntBASIC14.61□□□□□ -0.07
Msh6P54276 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.61□□□□□ -0.07
Msh6P54276 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.61□□□□□ -0.07
Msh6P54276 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.61□□□□□ -0.07
Msh6P54276 Gm40879-201ENSMUST00000220759 612 ntBASIC14.61□□□□□ -0.07
Msh6P54276 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Msh6P54276 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Msh6P54276 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Msh6P54276 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.61□□□□□ -0.07
Msh6P54276 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msh6P54276 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.6□□□□□ -0.07
Msh6P54276 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Gm43610-201ENSMUST00000199117 365 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Gm6423-201ENSMUST00000204315 934 ntBASIC14.6□□□□□ -0.07
Msh6P54276 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.6□□□□□ -0.07
Msh6P54276 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.6□□□□□ -0.07
Msh6P54276 Gm29067-201ENSMUST00000190821 470 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Gm5700-201ENSMUST00000191483 989 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Gm5870-201ENSMUST00000196461 282 ntBASIC14.6□□□□□ -0.07
Msh6P54276 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msh6P54276 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
Msh6P54276 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Gm12663-201ENSMUST00000118481 958 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.59□□□□□ -0.07
Msh6P54276 Gm3329-201ENSMUST00000159873 556 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Msh6P54276 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Msh6P54276 Gm9507-202ENSMUST00000180157 654 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gm44008-201ENSMUST00000204345 412 ntBASIC14.59□□□□□ -0.07
Msh6P54276 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.59□□□□□ -0.07
Msh6P54276 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.59□□□□□ -0.07
Msh6P54276 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Msh6P54276 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms