Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.59□□□□□ -0.55
Fdft1P53798 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fdft1P53798 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Fdft1P53798 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fdft1P53798 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.59□□□□□ -0.55
Fdft1P53798 Gm5616-201ENSMUST00000165252 384 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 Gm8741-201ENSMUST00000174736 384 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 AY036118-201ENSMUST00000200021 923 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 Gm45433-201ENSMUST00000209386 247 ntBASIC11.59□□□□□ -0.55
Fdft1P53798 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Fdft1P53798 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fdft1P53798 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.59□□□□□ -0.55
Fdft1P53798 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Fdft1P53798 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Fdft1P53798 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Fdft1P53798 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fdft1P53798 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Fdft1P53798 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Fdft1P53798 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm14130-201ENSMUST00000118417 987 ntBASIC11.58□□□□□ -0.56
Fdft1P53798 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.58□□□□□ -0.56
Fdft1P53798 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.58□□□□□ -0.56
Fdft1P53798 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.58□□□□□ -0.56
Fdft1P53798 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm4157-201ENSMUST00000211647 679 ntBASIC11.58□□□□□ -0.56
Fdft1P53798 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.58□□□□□ -0.56
Fdft1P53798 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.58□□□□□ -0.56
Fdft1P53798 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Fdft1P53798 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Fdft1P53798 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Fdft1P53798 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.57□□□□□ -0.56
Fdft1P53798 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Fdft1P53798 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Fdft1P53798 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Fdft1P53798 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Fdft1P53798 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Fdft1P53798 Gm11960-201ENSMUST00000122068 925 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms