Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.72□□□□□ -0.53
Lhx3P50481 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Gm8420-201ENSMUST00000097103 598 ntBASIC11.72□□□□□ -0.53
Lhx3P50481 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.72□□□□□ -0.53
Lhx3P50481 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lhx3P50481 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lhx3P50481 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lhx3P50481 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lhx3P50481 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lhx3P50481 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lhx3P50481 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Gm15131-201ENSMUST00000119124 595 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Gm43520-201ENSMUST00000197996 164 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Gm9463-201ENSMUST00000206707 601 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Gm45856-201ENSMUST00000212752 416 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lhx3P50481 Snora73b-201ENSMUST00000083419 205 ntBASIC11.71□□□□□ -0.53
Lhx3P50481 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lhx3P50481 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lhx3P50481 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lhx3P50481 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lhx3P50481 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.71□□□□□ -0.54
Lhx3P50481 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lhx3P50481 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.7□□□□□ -0.54
Lhx3P50481 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.7□□□□□ -0.54
Lhx3P50481 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.7□□□□□ -0.54
Lhx3P50481 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm14942-201ENSMUST00000119642 336 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Gm12029-201ENSMUST00000120073 832 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm25492-201ENSMUST00000157383 129 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm27910-201ENSMUST00000185004 107 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm5051-201ENSMUST00000204085 485 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Gm8285-201ENSMUST00000208293 759 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.7□□□□□ -0.54
Lhx3P50481 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lhx3P50481 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lhx3P50481 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 384.2 ms