Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Shmt1P50431 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Shmt1P50431 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Shmt1P50431 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm25076-201ENSMUST00000104098 132 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm16071-201ENSMUST00000119589 793 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Gm8737-201ENSMUST00000122208 642 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.24□□□□□ -0.45
Shmt1P50431 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm21092-201ENSMUST00000178995 955 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm17826-201ENSMUST00000189720 798 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Gm37299-201ENSMUST00000193951 826 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.24□□□□□ -0.45
Shmt1P50431 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Gm8342-201ENSMUST00000209839 757 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.24□□□□□ -0.45
Shmt1P50431 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.24□□□□□ -0.45
Shmt1P50431 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Shmt1P50431 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Shmt1P50431 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.23□□□□□ -0.45
Shmt1P50431 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm12247-201ENSMUST00000117585 670 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm11244-201ENSMUST00000121243 237 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm37458-201ENSMUST00000194055 410 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 Gm37981-201ENSMUST00000194280 535 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.23□□□□□ -0.45
Shmt1P50431 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.23□□□□□ -0.45
Shmt1P50431 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Shmt1P50431 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Shmt1P50431 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.23□□□□□ -0.45
Shmt1P50431 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shmt1P50431 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.22□□□□□ -0.45
Shmt1P50431 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shmt1P50431 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms