Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.8□□□□□ -0.2
Rfx1P48377 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.8□□□□□ -0.2
Rfx1P48377 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx1P48377 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Rfx1P48377 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rfx1P48377 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.8□□□□□ -0.2
Rfx1P48377 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Rfx1P48377 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.8□□□□□ -0.2
Rfx1P48377 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx1P48377 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.79□□□□□ -0.2
Rfx1P48377 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rfx1P48377 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rfx1P48377 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.79□□□□□ -0.2
Rfx1P48377 Gm5070-201ENSMUST00000177599 862 ntBASIC13.79□□□□□ -0.2
Rfx1P48377 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Gm9823-201ENSMUST00000051212 327 ntBASIC13.79□□□□□ -0.2
Rfx1P48377 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rfx1P48377 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rfx1P48377 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Rfx1P48377 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rfx1P48377 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rfx1P48377 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC13.79□□□□□ -0.2
Rfx1P48377 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Gm15370-201ENSMUST00000117158 253 ntBASIC13.78□□□□□ -0.2
Rfx1P48377 Gm15004-201ENSMUST00000119192 630 ntBASIC13.78□□□□□ -0.2
Rfx1P48377 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.78□□□□□ -0.2
Rfx1P48377 Mir1982-201ENSMUST00000157368 74 ntBASIC13.78□□□□□ -0.2
Rfx1P48377 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.78□□□□□ -0.2
Rfx1P48377 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.78□□□□□ -0.2
Rfx1P48377 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.78□□□□□ -0.2
Rfx1P48377 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.78□□□□□ -0.2
Rfx1P48377 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rfx1P48377 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rfx1P48377 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx1P48377 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx1P48377 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.77□□□□□ -0.2
Rfx1P48377 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Rfx1P48377 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rfx1P48377 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.77□□□□□ -0.21
Rfx1P48377 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rfx1P48377 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Rfx1P48377 Gm12015-201ENSMUST00000117065 843 ntBASIC13.77□□□□□ -0.21
Rfx1P48377 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.77□□□□□ -0.21
Rfx1P48377 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms